1. L. A. Gonzalez, W. Zhang, H. Bai, R. Taniguchi, A. B. Ramachandra, D. G. Jovin, Y. Ohashi, M. Nguyen, C. Thaxton, B. Yatsula, R. I Vazquez-Padron, J. D. Humphrey, K. A. Martin, T. R. Kyriakides, A. Dardik, (2025), Sustained tenascin-C expression drives neointimal hyperplasia and promotes aortocaval fistula failure, 328(6), pp.H1147-H1167.
2. B. Jiang*, P. Ren*, C. He, M. Wang, S. Murtada, M. J. Ruiz-Rodriguez, Y. Chen, A. B. Ramachandra, G. Li, L. Qin, R. Assi, M. A. Schwartz, J. D. Humphrey, and G. Tellides, (2025), Short-term disruption of TGF-β signaling in adult mice renders the aorta vulnerable to hypertension-induced dissection, JCI Insight, 10(6):e182629.
3. A.M. Corpuz, M. Jaiswal, P. Du, A. B. Ramachandra, J.X. Wang, and M.C. Hsu, (2025),Direct medical image to simulation using auto-segmentation and point cloud-based CFD, Advances in Computational Science and Engineering, 3, pp.95-124.
4. D. Weiss, N. Yeung, A. B. Ramachandra, J. D. Humphrey, (2024), Transcriptional regulation of postnatal aortic development, Cells & Development, Volume 180, December 2024, 203971.
5. T. Bärnthaler, A. B. Ramachandra, S. Ebanks, N. Guerrera, L. Sharma, C. Dela Cruz, J. Humphrey, and E. Manning, (2024), Developmental changes in lung function of mice are independent of sex as a biological variable, American Journal of Physiology-Lung Cellular and Molecular Physiology, 326.5: L627-L637.
6. E. P. Manning, P. Mishall, A. B. Ramachandra, A. H. M. Hassab, J. Lamy, D. Peters, et al., (2024), Stiffening of the human proximal pulmonary artery with increasing age, Physiological Reports,12 (12), e16090.
7. A. Giudici, J. M. Szafron, A. B. Ramachandra and B. Spronck, (2024), Instability in computational models of vascular smooth muscle cell contraction, Annals of Biomedical Engineering,1:14.
8. A.B. Ramachandra , B. Jiang, I. Jennings, E. P. Manning and J. D. Humphrey, (2024), Remodeling of murine branch pulmonary arteries under chronic hypoxia and short-term normoxic recovery, Journal of Biomechanical Engineering, in print.
9. A. B. Ramachandra*, C. Cavinato*, and J. D. Humphrey, (2024), A systematic comparison of normal structure and function of greater thoracic vessels involved in single ventricle repair, Annals of Biomedical Engineering, 1:9.
10. M. Salarian, M. Ghim, J. Toczek, J. Han, D. Weiss, B. Spronck, A. B. Ramachandra, J.-J. Jung, G. Kukreja, J. Zhang, D. Lakerheram, S.- K. Kim, J. D. Humphrey, and M. M. Sadeghi, (2023), Homeostatic, non-canonical role of macrophage elastase in vascular integrity, Circulation Research, 132:432–448.
11. S-I. Murtada*, A. B. Ramachandra*, and J. D. Humphrey, (2023), Ex Vivo Biomechanical Assessment of Umbilical Vessels as Possible Shunts in Congenital Heart Palliation, accepted, Journal of Biomechanics, 151, 111518.
12. S-I. Murtada, N. Mikush, M. Wang, P. Ren, Y. Kawamura, A.B. Ramachandra, D. S. Li, D.T. Braddock, G. Tellides, L.B. Gordon, and J.D. Humphrey, (2023), Lonafarnib improves cardiovascular function and survival in a mouse model of Hutchinson-Gilford Progeria Syndrome , Elife, 12: e82728.
13. S-I. Murtada, Y. Kawamura, C. Cavinato, M. Wang, A.B. Ramachandra, B. Spronck, D. S. Li, G. Tellides, and J.D. Humphrey, (2023), Biomechanical and transcriptional evidence that smooth muscle cell death drives an osteochondrogenic phenotype and severe proximal vascular disease in progeria, Biomechanics and Modeling in Mechanobiology, 1-15.
14. E. Ban, P-D. Kalogerakos, R. Khosravi, B. A. Ziganshin, H. Ellauzi, A. B. Ramachandra , M.A. Zafar, J. D. Humphrey, and J. A. Elefteriades, (2023), Extended law of laplace for measurement of the cloverleaf anatomy of the aortic root , The International Journal of Cardiovascular Imaging, 1-12.
15. A. Greaney, A. B. Ramachandra, Y. Yuan, A.Korneva, J. D. Humphrey, and L. Niklason, (2023), Decellularization compromises mechanical and structural properties of the native trachea, Biomaterials and Biosystems, 100074.
16. A. B. Ramachandra*, H. Wang*, A. Wnorowski*, et. al., (2022), Biodegradable external wrapping promotes favorable adaptation in an ovine vein graft model, Acta Biomaterialia, 151, pp.414-425
17. B. Spronck, A. B. Ramachandra , L. Moriyama, J. Toczek, J. Han, M. M. Sadeghi, and J. D. Humphrey, Deletion of matrix metalloproteinase-12 compromises mechanical homeostasis and leads to an aged aortic phenotype in young mice, Journal of Biomechanics, 111179.
18. A. B. Ramachandra, N. Guerrera, M. Sauler, J. D. Humphrey, and E. Manning, (2022), Compromised Cardiopulmonary function in Fibulin-5 Deficient Mice, Journal of Biomechanical Engineering, 144.8: 081008.
19. K. M. Blum ∗ , J. C. Zbinden ∗ , A. B. Ramachandra∗, S. E. Lindsey ∗ , J. M. Szafron ∗ , et al. (2022), Tissue Engineered Vascular Grafts Transform into Autologous Neovessels Capable of Native Function and Growth, Communications Medicine, 2, 3.
20. M. Latorre, J. Szafron, A. B. Ramachandra, and J. D. Humphrey, (2022), In Vivo Development of Tissue Engineered Vascular Grafts: A Fluid-Solid-Growth Model, Biomechanics and Modeling in Mechanobiology, 1-22.
21. J. Seo *, A.B. Ramachandra*, J. Boyd, A.L. Marsden, & A.M. Kahn, (2021), Computational Evaluation of Venous Graft Geometries in Coronary Artery Bypass Surgery, Seminars in Thoracic and Cardiovascular Surgery, in press
22. E. P. Manning, A. B. Ramachandra, J. C. Schupp, C. Cavinato, M. S. Brickman Raredon, T. Bärnthaler, C. Cosme, I. Singh, N. Kaminski, and J. D. Humphrey, (2021), Novel Mechanisms of Pulmonary Arterial Stiffening in Mice due to Hypoxia Using a Functional Genetics Assay of Structural, Functional, and Transcriptomic Data, Frontiers in Physiology, 12.
23. B. Spronck, M. Latorre, M. Wang, S. Mehta, A. Caulk, P. Ren, A.B. Ramachandra, S. Murtada, A. Rojas, C. He, B. Jiang, M. Bersi, G. Tellides, J. D. Humphrey, (2021), Excessive adventitial stress drives inflammation-mediated fibrosis in hypertensive aortic remodelling in mice, Journal of the Royal Society Interface, 18.180: 20210336.
24. E. Schwarz, J. Kelly, K. Blum, K. Hor, A. Yates, J. Zbinden, A. Verma, S. Lindsey, A. B. Ramachandra, J. Szafron, J. D. Humphrey, T. Shinoka, A. L. Marsden, C. K. Breuer, (2021), Hemodynamic performance of tissue-engineered vascular grafts in Fontan patients, npj Regenerative Medicine, 6.1: 1-17.
25. D. Weiss, C. Cavinato, A. Gray, A. B. Ramachandra, S. Avril, J. D. Humphrey, M.L. Latorre, (2020), Mechanics-Driven Mechanobiological Mechanisms of Arterial Tortuosity, Science Advances, 6.49, eabd3574.
26. J. Zbinden, K. Blum, A.G. Berman, A. B. Ramachandra, J.M. Szafron, K. Kerr, J. L. Anderson, G. S. Sangha, C. C. Earl, N. R. Nigh, G. Mirhaidari, J. Reinhardt, Y. Chang, T. Yi, R. Smalley, P. Gabriele, J.J. Harris, J. D. Humphrey, C. J. Goergen, C.K. Breuer, (2020), Effects of Braiding Parameters on Tissue Engineered Vascular Graft Development, Advanced Healthcare Materials, 2001093.
27. H. Bai, N. Sadaghianloo, J. Gorecka, S. Liu, S. Ono, A. B. Ramachandra, S. Bonnet, N. M. Mazure, S. Declemy, J. D. Humphrey, A. Dardik, (2020), Artery to vein configuration of arteriovenous fistula improves hemodynamics to increase maturation and patency, Science Translational Medicine, 12(557).
28. A. B. Ramachandra, M. Latorre, J. M. Szafron, A. L. Marsden, and J. D. Humphrey, (2020), Vascular Adaptation in the Presence of External Support - A Modeling Study, Journal of the Mechanical Behavior of Biomedical Materials, 110, 103943
29. J. D. Drews, V. K. Pepper, C. A. Best, J. M. Szafron, J. P. Cheatham, A. R. Yates., K. N. Hor, J. C. Zbinden, Y. C. Chang, G. J. Mirhaidari, A. B. Ramachandra, et. al., (2020), Spontaneous reversal of stenosis in tissue-engineered vascular grafts, Science Translational Medicine, 12(537).
30. R. Khosravi*, A. B. Ramachandra*, J. M. Szafron, D. E. Schiavazzi, C.K. Breuer, & J. D. Humphrey, (2020), A computational bio-chemo-mechanical model of in vivo tissue-engineered vascular graft development, Integrative Biology, 12(3), 47-63
31. J. M. Szafron, A. B. Ramachandra, C. K. Breuer, A. L. Marsden, & J. D. Humphrey, (2019), Optimization of Tissue Engineered Vascular Graft Design Using Computational Modeling, Tissue Engineering C: Methods, 25.10, 561-570, 2019
32. A. B. Ramachandra, & J.D. Humphrey, (2018), Biomechanical characterization of murine pulmonary arteries, Journal of Biomechanics., 84, 18-26
33. A. B. Ramachandra, J. D. Humphrey, & A. L. Marsden, (2017), Gradual loading ameliorates maladaptation in computational simulations of vein graft growth and remodelling, Journal of The Royal Society Interface, 14(130), 20160995.
34. J. S. Tran, D. E. Schiavazzi, A. B. Ramachandra, A. M. Kahn, & A. L. Marsden, (2017), Automated tuning for parameter identification and uncertainty quantification in multi-scale coronary simulations, Computers & Fluids, 142, 128-138.
35. A. B. Ramachandra, A.M. Kahn, & A. L. Marsden, (2016), Patient-specific simulations reveal significant differences in mechanical stimuli in venous and arterial coronary grafts, Journal of Cardiovascular Translational Research, 9(4), 279-290.
36. A. B. Ramachandra, S. Sankaran, J. D. Humphrey, & A. L. Marsden, (2015), Computational simulation of the adaptive capacity of vein grafts in response to increased pressure, Journal of Biomechanical Engineering, 137(3), 031009.

Submitted/Under Review/Preprint

1. A. B. Ramachandra∗, P. Sharma∗, R. De Man∗, et al., Hypoxia-Induced Cardiopulmonary Remodeling and Recovery: Critical Roles of the Proximal Pulmonary Artery, Macrophages, and Exercise.
2. E. Schwarz, A. B. Ramachandra∗, N. Yeung, E. P. Manning, D. Weiss, & J. D. Humphrey, Postnatal Pulmonary Artery Development from Transcript to Tissue.
3. R. De Man, Z. Cai, P. Doddaballapur, N. Guerrera, L. Lin, A. Justet, N. S. Abu Hussein, C. Cavinato, M. S. Brickman Raredon, P. Heerdt, I. Singh, X. Yan, M. Kang, D. R. Bruns, P. J. Lee, G. Tellides, J. D. Humphrey, N. Kaminski, A. B. Ramachandra*, E. P. Manning*, Proximal Pulmonary Artery Stiffening as a Biomarker of Cardiopulmonary Aging.